STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMCHD1Structural maintenance of chromosomes flexible hinge domain-containing protein 1. (638 aa)    
Predicted Functional Partners:
METTL4
N(6)-adenine-specific DNA methyltransferase.
   
  
 0.902
MVB12A
Multivesicular body subunit 12A.
    
   0.857
LRIF1
Ligand-dependent nuclear receptor-interacting factor 1.
    
 
 0.799
NUDCD1
NudC domain-containing protein 1 isoform X1.
    
   0.797
MACROH2A2
Core histone macro-H2A.2.
    
 
 0.758
PDS5A
Sister chromatid cohesion protein PDS5 homolog A isoform X1.
   
  
 0.712
MACROH2A1
Core histone macro-H2A.1 isoform X1.
    
 
 0.695
NUP133
Nuclear pore complex protein Nup133 isoform X1.
   
  
 0.662
NARS2
Probable asparagine--tRNA ligase, mitochondrial.
    
   0.616
SCAF11
Protein SCAF11 isoform X1.
   
    0.615
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.