Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DYSFDysferlin. (2090 aa)    
Predicted Functional Partners:
TRIM72
Tripartite motif-containing protein 72.
     
 0.594
ANXA6
Annexin A6 isoform X1.
   
 0.585
ANXA2-2
Annexin A2.
   
 0.575
ANXA1
Annexin A1.
   
 0.542
TRIM50
Tripartite motif-containing protein 50/73/74.
     
 0.470
CAV3
Caveolin-3-like.
   
 0.466
LOC110078663
Caveolin-2-like.
   
 0.447
PITRM1
LOW QUALITY PROTEIN: presequence protease, mitochondrial-like.
      
 0.436
ANXA5
Annexin A5.
   
 0.421
ANO5
Anoctamin-5 isoform X1.
      
 0.407
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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