STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX1Paired box protein Pax-1. (385 aa)    
Predicted Functional Partners:
FGF4
Fibroblast growth factor 4.
      
 0.679
SOX5
Transcription factor SOX5/6/13 (SOX group D).
      
 0.679
GATA1
GATA binding protein 1.
   
  
 0.563
LMO2
LIM domain only 2.
      
 0.559
NFE2
Transcription factor NF-E2 45 kDa subunit.
      
 0.501
MEOX1
Homeobox protein MOX-1.
    
 
 0.501
MEOX2
Homeobox protein MOX-2.
    
 
 0.476
NKX3-2
Homeobox protein Nkx-3.2.
      
 0.465
HOXA3
Homeobox A3.
    
 
 0.424
MSX1
Homeobox protein MSX-1.
    
 
 0.409
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.