STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGIF1Homeobox protein TGIF1. (267 aa)    
Predicted Functional Partners:
SMAD2
SMAD family member 2.
    
 0.966
TGIF2
Homeobox protein TGIF2 isoform X1.
  
  
 
0.904
SMAD3
SMAD family member 3.
    
 0.685
CDYL2
Chromodomain Y like 2.
      
 0.620
BCL2L14
Apoptosis facilitator Bcl-2-like protein 14.
   
  
 0.587
HDAC2
Histone deacetylase 2 isoform X1.
   
 0.582
HDAC1
Histone deacetylase 1/2.
   
 0.582
HDAC8
Histone deacetylase 8 isoform X1.
   
 0.582
NR1D1
Nuclear receptor subfamily 1 group D member 1 isoform X1.
      
 0.545
SINHCAF
Protein FAM60A.
   
 
 0.536
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.