STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPLP1Large subunit ribosomal protein LP1. (58 aa)    
Predicted Functional Partners:
RPLP0
Large subunit ribosomal protein LP0.
  
 0.997
RPL5
Large subunit ribosomal protein L5e.
   
 0.996
RPL30
Large subunit ribosomal protein L30e.
   
 0.996
RPL39
Large subunit ribosomal protein L39e.
   
 0.996
RPL11
60S ribosomal protein L11 isoform X1.
   
 0.996
RPL38
Large subunit ribosomal protein L38e.
   
 0.995
RPL4
Large subunit ribosomal protein L4e.
   
 0.995
RPL29
Ribosomal protein L29.
   
 0.995
RPL14
Large subunit ribosomal protein L14e.
   
 0.994
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.994
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.