STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGO2Eukaryotic translation initiation factor 2C. (782 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer.
   
 0.978
TNRC6B
Trinucleotide repeat-containing gene 6B protein.
    
 0.929
GEMIN4
Gem-associated protein 4 isoform X1.
    
 
 0.929
DDX20
Probable ATP-dependent RNA helicase DDX20.
    
 
 0.926
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 
 0.901
DHX9
ATP-dependent RNA helicase A isoform X1.
   
 
 0.876
TARBP2
RISC-loading complex subunit TARBP2 isoform X1.
    
 0.863
PRKRA
Interferon-inducible double-stranded RNA-dependent protein kinase activator A isoform X1.
    
 0.863
ELAVL1
ELAV-like protein 1.
   
 
 0.844
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.810
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.