Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HID1Protein HID1. (779 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
   
 
 0.778
NUP133
Nuclear pore complex protein Nup133 isoform X1.
   
 
 0.726
NUP155
Nuclear pore complex protein Nup155.
    
 
 0.722
NUP214
Nucleoporin 214.
    
 
 0.718
NUP54
Nuclear pore complex protein Nup54.
   
 
 0.717
NXF1
Nuclear RNA export factor 1.
    
 
 0.691
OTOP2
Otopetrin-2.
      
 0.688
PA2G4
Proliferation-associated protein 2G4.
    
   0.665
RAE1
MRNA export factor isoform X1.
    
 
 0.662
USP40
Ubiquitin carboxyl-terminal hydrolase 40 isoform X1.
    
 
 0.648
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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