STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRAC1Chromatin accessibility complex protein 1. (139 aa)    
Predicted Functional Partners:
POLE3
DNA polymerase epsilon subunit 3.
    
 0.996
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 
 0.979
SMARCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1.
   
 0.911
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
   
 0.911
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.884
NFYA
Nuclear transcription factor Y subunit alpha isoform X1.
    
 0.880
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
   
 0.859
RSF1
Remodeling and spacing factor 1.
     
 0.799
LOC110085431
Cytochrome c oxidase assembly factor 5-like.
      
 0.795
RBM7
RNA-binding protein 7 isoform X1.
      
 0.697
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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