Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUMO1Small ubiquitin-related modifier 1. (101 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin-conjugating enzyme E2 I.
   
 0.999
UBA2
Ubiquitin like modifier activating enzyme 2.
   
 0.998
RANGAP1
Ran GTPase-activating protein 1.
    
 0.994
SAE1
Ubiquitin-like 1-activating enzyme E1 A.
   
 0.994
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 0.984
SUMO2
Small ubiquitin-related modifier 2.
  
0.975
PIAS4
Protein inhibitor of activated STAT 4.
    
 0.973
TDG
G/T mismatch-specific thymine DNA glycosylase.
   
 0.969
DAXX
Death domain-associated protein 6 isoform X1.
    
 0.968
PML
Promyelocytic leukemia.
    
 0.966
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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