STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP45Ubiquitin carboxyl-terminal hydrolase 45 isoform X1. (833 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
  
 0.654
RPS27A
Ribosomal protein S27a.
    
  0.587
UBC
Polyubiquitin-C.
    
 0.583
OTUD6B
OTU domain-containing protein 6B.
   
  
 0.562
OTUB1
Ubiquitin thioesterase OTUB1 isoform X1.
      
 0.559
KLHL7
Kelch-like protein 7 isoform X1.
      
 0.557
ERCC1
DNA excision repair protein ERCC-1 isoform X1.
    
 0.518
USP39
U4/U6.U5 tri-snRNP-associated protein 2.
      
 0.505
CLSPN
Claspin.
      
 0.471
TRAF5
TNF receptor-associated factor 5 isoform X1.
      
 0.447
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.