STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM104Transmembrane protein 104 isoform X1. (499 aa)    
Predicted Functional Partners:
WDR54
WD repeat-containing protein 54.
      
 0.642
WDR53
WD repeat-containing protein 53 isoform X1.
      
 0.628
NAT9
N-acetyltransferase 9 (putative).
      
 0.618
NAT9-2
N-acetyltransferase 9.
      
 0.618
RPL38
Large subunit ribosomal protein L38e.
      
 0.605
SYTL5
Synaptotagmin-like protein 5 isoform X1.
      
 0.583
UNC93A
Protein unc-93 homolog A.
      
 0.573
SUPV3L1
ATP-dependent RNA helicase SUPV3L1, mitochondrial.
      
 0.521
SVOPL
Putative transporter SVOPL.
      
 0.499
FADS6
Fatty acid desaturase 6.
      
 0.470
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.