STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNISRSplicing factor, arginine/serine-rich 18. (854 aa)    
Predicted Functional Partners:
LUC7L3
Luc7-like protein 3 isoform X1.
   
  
 0.991
NKTR
NK-tumor recognition protein isoform X1.
  
 0.953
PNN
Pinin.
   
 
 0.935
SON
Protein SON isoform X1.
   
 0.905
SRSF11
Serine/arginine-rich splicing factor 11 isoform X1.
   
 
 0.885
SREK1
Splicing regulatory glutamine/lysine-rich protein 1.
   
 
 0.885
ENSPVIP00000014038
Pre-mRNA-processing factor 39-like isoform X1.
   
  
 0.781
PRPF39
Pre-mRNA-processing factor 39.
   
  
 0.781
ANKRD16
Ankyrin repeat domain-containing protein 16.
   
 0.770
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.761
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.