STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110079420Uncharacterized protein LOC110079420 isoform X1. (530 aa)    
Predicted Functional Partners:
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
    
   0.786
LSM5
U6 snRNA-associated Sm-like protein LSm5 isoform X1.
    
   0.774
LSM6
U6 snRNA-associated Sm-like protein LSm6.
    
   0.774
ASCC2
Activating signal cointegrator 1 complex subunit 2 isoform X1.
    
 0.734
TRIP4
Activating signal cointegrator 1 isoform X1.
   
 
 0.666
AKAP6
A-kinase anchor protein 6.
      
 0.620
PRKACA
CAMP-dependent protein kinase catalytic subunit alpha isoform X1.
    
 
 0.608
PRKACB
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
    
 
 0.608
AKAP1
A-kinase anchor protein 1, mitochondrial.
      
 0.597
DAP3
28S ribosomal protein S29, mitochondrial.
    
   0.594
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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