STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110079420Uncharacterized protein LOC110079420 isoform X1. (530 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2 isoform X1.
    
 0.783
SOD2
Superoxide dismutase [Mn], mitochondrial.
    
   0.697
YBEY
Putative ribonuclease isoform X1.
    
   0.697
DAP3
28S ribosomal protein S29, mitochondrial.
    
   0.697
RPS11
Small subunit ribosomal protein S11e.
    
   0.685
MRPL13
39S ribosomal protein L13, mitochondrial.
   
   0.617
MRPL46
39S ribosomal protein L46, mitochondrial.
    
   0.609
MRPL11
39S ribosomal protein L11, mitochondrial isoform X1.
    
   0.609
MRPL47
39S ribosomal protein L47, mitochondrial.
    
   0.609
MRPL43
39S ribosomal protein L43, mitochondrial.
    
   0.609
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.