STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM3Small G protein signaling modulator 3. (752 aa)    
Predicted Functional Partners:
ZMYM4
Zinc finger MYM-type protein 4.
     
 0.578
OTUD3
OTU domain-containing protein 3.
      
 0.563
NUBPL
ATP-binding protein involved in chromosome partitioning.
      
 0.560
UFSP2
Ufm1-specific protease 2 isoform X1.
      
 0.560
PELO
Protein pelota homolog.
   
  
 0.481
CCDC170
Coiled-coil domain-containing protein 170.
      
 0.473
TBC1D13
TBC1 domain family member 13.
      
 0.412
TBC1D23
TBC1 domain family member 23 isoform X1.
      
 0.402
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
      
 0.400
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.