Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SGSM3Small G protein signaling modulator 3. (752 aa)    
Predicted Functional Partners:
PPWD1
Peptidylprolyl isomerase domain and WD repeat-containing protein 1.
    
   0.770
ZMYM4
Zinc finger MYM-type protein 4.
     
 0.698
ATP13A1
Manganese-transporting P-type ATPase.
      
 0.695
NUBPL
ATP-binding protein involved in chromosome partitioning.
      
 0.692
SMIM7
Small integral membrane protein 7.
    
   0.665
COG4
Conserved oligomeric Golgi complex subunit 4.
    
   0.665
PELO
Protein pelota homolog.
   
  
 0.663
UFSP2
Ufm1-specific protease 2 isoform X1.
      
 0.657
OTUD3
OTU domain-containing protein 3.
      
 0.612
CCDC170
Coiled-coil domain-containing protein 170.
      
 0.604
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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