STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RETREG3Protein FAM134C isoform X1. (476 aa)    
Predicted Functional Partners:
NMD3
Nonsense-mediated mRNA decay protein 3.
   
 
 0.798
PA2G4
Proliferation-associated protein 2G4.
   
 
 0.725
TMEM171
Transmembrane protein 171.
      
 0.697
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.686
MANSC1
MANSC domain-containing protein 1.
    
 
 0.652
GNL2
Nucleolar GTP-binding protein 2.
   
 
 0.649
DNAJC21
DnaJ homolog subfamily C member 21.
   
 
 0.645
GNL1
Guanine nucleotide-binding protein-like 1 isoform X1.
   
 
 0.627
LSG1
Large subunit GTPase 1 homolog.
   
 
 0.627
ENSPVIP00000000846
annotation not available
   
 
 0.626
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.