STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFHC1EF-hand domain-containing protein 1 isoform X1. (639 aa)    
Predicted Functional Partners:
WDR90
WD repeat-containing protein 90-like.
    
 
 0.945
PACRG
Parkin coregulated gene protein.
  
 
 0.856
CFAP52
Cilia- and flagella-associated protein 52.
  
 
 0.831
TEKT1
Tektin-1.
   
 
 0.812
EFHB
EF-hand domain-containing family member B isoform X1.
   
   0.782
TEKT2
Tektin-2.
   
 
 0.778
TEKT3
Tektin-3.
   
 
 0.770
PACRGL
PACRG-like protein isoform X1.
   
 
 0.756
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.753
CFAP20
Cilia- and flagella-associated protein 20.
    
 
 0.752
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.