STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAM2Translocating chain-associated membrane protein 2. (372 aa)    
Predicted Functional Partners:
CTSB
Cathepsin B isoform X1.
      
 0.947
MTMR9
Myotubularin-related protein 9.
      
 0.699
XKR5
XK-related protein 5.
      
 0.671
XKR6
XK related 6.
      
 0.671
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
   
 
 0.640
SEC63
Translocation protein SEC63 homolog.
   
 
 0.620
LOC110082731
Myotubularin-related protein 9-like isoform X1.
      
 0.573
RPN2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2.
   
 
 0.552
SSR2
Translocon-associated protein subunit beta.
   
 
 0.537
BLK
Tyrosine-protein kinase Blk-like isoform X1.
      
 0.494
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.