STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM67Tripartite motif-containing protein 9/67. (528 aa)    
Predicted Functional Partners:
TSNAX
Disrupted in schizophrenia 1 protein isoform X1.
    
 
 0.641
EXOC1
Exocyst complex component 1 isoform X1.
    
   0.633
ARHGEF10
Rho guanine nucleotide exchange factor 10 isoform X1.
    
 
 0.622
TRIM9
Tripartite motif containing 9.
    
   0.616
CRIPT
Cysteine-rich PDZ-binding protein.
      
 0.613
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
    
 
 0.604
FAM89A
Protein FAM89A.
      
 0.570
BBOX1
Gamma-butyrobetaine dioxygenase.
    
 
 0.561
SNAP47
Synaptosomal-associated protein 47.
   
 
 0.547
GAD2
Glutamate decarboxylase 2.
   
 
 0.487
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.