STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWI5SWI5 homologous recombination repair protein. (165 aa)    
Predicted Functional Partners:
BLOC1S1
Biogenesis of lysosome-related organelles complex 1 subunit 1.
   
 0.929
SNAPIN
SNARE-associated protein Snapin.
   
 0.928
DTNBP1
Dysbindin.
    
 0.920
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6.
    
 0.879
BORCS7
BLOC-1 related complex subunit 7.
    
 0.859
BORCS8
BLOC-1 related complex subunit 8.
   
 0.852
BORCS6
BLOC-1 related complex subunit 6.
    
 0.849
BLOC1S3
Biogenesis of lysosome-related organelles complex 1 subunit 3.
    
 0.841
KXD1
KxDL motif-containing protein 1.
    
 0.837
BORCS5
BLOC-1 related complex subunit 5.
     
 0.824
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.