STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRUB2Probable tRNA pseudouridine synthase 2 isoform X1. (325 aa)    
Predicted Functional Partners:
NOP58
Nucleolar protein 58 isoform X1.
  
 0.966
NOP56
Nucleolar protein 56.
   
 0.965
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 0.964
GAR1
H/ACA ribonucleoprotein complex subunit 1.
   
 0.957
NOP10
H/ACA ribonucleoprotein complex subunit 3.
   
 0.943
SHQ1
Protein SHQ1 homolog.
   
 0.920
NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1.
   
 0.917
NAT10
RNA cytidine acetyltransferase.
   
 0.898
WRAP53
Telomerase Cajal body protein 1.
    
 0.865
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 0.835
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.