STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070088Deoxyribodipyrimidine photo-lyase-like. (548 aa)    
Predicted Functional Partners:
TIMELESS
Protein timeless homolog isoform X1.
    
 0.707
PER3
LOW QUALITY PROTEIN: period circadian protein homolog 3.
   
 0.565
PER1
Period circadian regulator 1.
   
 0.565
PER2
Period circadian protein homolog 2 isoform X1.
   
 0.565
LOC110088812
Cryptochrome-1-like.
      
 0.491
SOD2
Superoxide dismutase [Mn], mitochondrial.
  
   0.483
POLR1E
DNA-directed RNA polymerase I subunit RPA49.
      
 0.478
TSPO2
Translocator protein 2.
  
  
 0.439
TSPO
Translocator protein.
  
  
 0.439
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
    0.433
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.