Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110070088Deoxyribodipyrimidine photo-lyase-like. (548 aa)    
Predicted Functional Partners:
TIMELESS
Protein timeless homolog isoform X1.
    
 0.729
LOC110088812
Cryptochrome-1-like.
      
 0.621
PER3
LOW QUALITY PROTEIN: period circadian protein homolog 3.
   
 0.603
PER1
Period circadian regulator 1.
   
 0.603
PER2
Period circadian protein homolog 2 isoform X1.
   
 0.603
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
    0.531
WDR6
WD repeat-containing protein 6.
   
    0.503
DDB2
DNA damage-binding protein 2 isoform X1.
   
  
 0.486
ARNT
Aryl hydrocarbon receptor nuclear translocator isoform X1.
   
 0.481
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2 isoform X1.
   
 0.481
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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