STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKRIP1PRKR-interacting protein 1 homolog. (166 aa)    
Predicted Functional Partners:
FAM32A
Protein FAM32A.
     
 0.893
SLU7
Pre-mRNA-processing factor SLU7.
   
 
 0.859
SNRPA1
U2 small nuclear ribonucleoprotein A.
    
   0.854
SDE2
Protein SDE2 homolog isoform X1.
     
 0.849
SNRPE
Small nuclear ribonucleoprotein E.
    
   0.847
NKAP
NFKB activating protein.
   
 
 0.842
CACTIN
Cactin.
     
 0.832
CXorf56
UPF0428 protein CXorf56 homolog.
   
 
 0.826
CDC40
Pre-mRNA-processing factor 17.
     
 0.788
AQR
Intron-binding protein aquarius isoform X1.
    
   0.785
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.