STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKRIP1PRKR-interacting protein 1 homolog. (166 aa)    
Predicted Functional Partners:
FAM32A
Protein FAM32A.
    
 0.883
SLU7
Pre-mRNA-processing factor SLU7.
   
 0.866
SDE2
Protein SDE2 homolog isoform X1.
    
 0.863
CDC40
Pre-mRNA-processing factor 17.
    
 0.848
NKAP
NFKB activating protein.
   
 0.825
CACTIN
Cactin.
    
 0.813
SYF2
Pre-mRNA-splicing factor SYF2.
   
  0.784
CWC22
Pre-mRNA-splicing factor CWC22 homolog.
    
 0.781
PPIL1
Peptidyl-prolyl cis-trans isomerase-like 1 isoform X1.
    
  0.776
SNRPE
Small nuclear ribonucleoprotein E.
    
   0.743
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.