Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SF3B6Pre-mRNA branch site protein p14. (125 aa)    
Predicted Functional Partners:
SF3B5
Splicing factor 3B subunit 5 isoform X1.
   
 0.999
PHF5A
PHD finger-like domain-containing protein 5A.
   
 0.998
SF3B3
Splicing factor 3B subunit 3.
    
 0.998
SF3B4
Splicing factor 3B subunit 4.
    
 0.998
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.997
SF3B2
Splicing factor 3b subunit 2.
    
 0.997
DDX42
ATP-dependent RNA helicase DDX42 isoform X1.
    
  0.981
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.978
U2AF2
Splicing factor U2AF 65 kDa subunit.
   
 
 0.965
SF3A2
Splicing factor 3A subunit 2.
   
 0.962
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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