STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASEH2BRibonuclease H2 subunit B isoform X1. (471 aa)    
Predicted Functional Partners:
RNASEH2A
Ribonuclease H2 subunit A.
   
 0.999
RNASEH2C
Ribonuclease H2 subunit C.
   
 0.997
PCNA
Proliferating cell nuclear antigen isoform X1.
   
 
 0.789
MCM6
DNA replication licensing factor MCM6.
   
 
 0.768
REXO4
REX4 homolog, 3'-5' exonuclease.
     
 0.699
PGS1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial isoform X1.
   
    0.673
RECQL4
RecQ like helicase 4.
   
 
 0.667
CPNE9
Copine-9.
   
 0.664
CPNE1
Copine-1-like isoform X1.
   
 0.664
CPNE8
Copine-8 isoform X1.
   
 0.664
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.