STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKBIENF-kappa-B inhibitor epsilon. (391 aa)    
Predicted Functional Partners:
NFKBIB
NF-kappa-B inhibitor beta.
  
0.979
RELA
Transcription factor p65.
   
 0.976
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1.
    
 0.975
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.971
NFKBIA
NF-kappa-B inhibitor alpha.
  
0.967
NFKB1
Nuclear factor NF-kappa-B p105 subunit isoform X1.
  
0.962
IKBKG
Inhibitor of nuclear factor kappa-B kinase subunit gamma.
   
 0.914
REL
REL proto-oncogene, NF-kB subunit.
 
 
 0.770
RELB
Transcription factor RelB isoform X1.
   
 0.770
PPP6C
Serine/threonine-protein phosphatase 6 catalytic subunit.
    
 0.715
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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