Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ERMARDEndoplasmic reticulum membrane-associated RNA degradation protein isoform X1. (670 aa)    
Predicted Functional Partners:
CCT7
T-complex protein 1 subunit eta.
   
 0.974
CCT5
T-complex protein 1 subunit epsilon.
   
 0.971
CCT8
T-complex protein 1 subunit theta isoform X1.
   
 0.971
CCT2
T-complex protein 1 subunit beta.
   
 0.971
CCT4
T-complex protein 1 subunit delta.
   
 0.968
TCP1
T-complex protein 1 subunit alpha.
   
 0.968
CCT6B
T-complex protein 1 subunit zeta.
   
 0.945
CCT8L2
Chaperonin containing TCP1 subunit 8 like 2.
   
 0.898
FAM161A
Protein FAM161A.
   
 0.885
BBS10
Bardet-Biedl syndrome 10 protein.
   
 0.878
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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