Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DLL1Delta-like protein 1 isoform X1. (854 aa)    
Predicted Functional Partners:
NOTCH1
Neurogenic locus notch homolog protein 1-like.
    
0.989
NOTCH3
Notch receptor 3.
    
0.987
ENSPVIP00000014000
Neurogenic locus notch homolog protein 4-like.
 
  
 0.978
DLL4
Delta-like protein 4.
  
  
 
0.924
ENSPVIP00000016142
annotation not available
    
 0.781
MIB1
E3 ubiquitin-protein ligase mind-bomb.
   
 0.720
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 0.718
ADAM10
Disintegrin and metalloproteinase domain-containing protein 10.
    
 0.660
UNC5D
Netrin receptor UNC5D.
      
 0.572
MAML1
Mastermind-like protein 1.
    
 0.552
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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