STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP7BCopper-transporting ATPase 2. (1522 aa)    
Predicted Functional Partners:
ATOX1
Copper transport protein ATOX1.
    
 0.971
CCS
Copper chaperone for superoxide dismutase.
  
 0.934
PDZD11
PDZ domain-containing protein 11 isoform X1.
    
 0.833
COMMD1
COMM domain-containing protein 1 isoform X1.
    
 
 0.820
CP
Ceruloplasmin.
  
 
 0.716
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
      
 0.664
SLC31A1
Solute carrier family 31 (copper transporter), member 1.
    
 
 0.660
BDNF
Brain-derived neurotrophic factor isoform X1.
      
 0.654
BRCA1
Breast cancer type 1 susceptibility protein.
      
 0.627
RAG1
V(D)J recombination-activating protein 1.
      
 0.604
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.