STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS2Thrombospondin 2/3/4/5. (1178 aa)    
Predicted Functional Partners:
ITGB3
Integrin subunit beta 3.
   
 0.963
ITGA3
Integrin alpha-3 isoform X1.
   
 0.958
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 0.956
SDC1
Syndecan 1.
    
 0.952
ITGAV
Integrin alpha V.
   
 0.951
ITGA2B
Integrin alpha-IIb.
   
 0.948
CD36
Platelet glycoprotein 4 isoform X1.
    
 0.947
ITGB1
Integrin beta-1 isoform X1.
   
 0.941
SDC4
Syndecan 4.
    
  0.903
ITGA4
Integrin subunit alpha 4.
   
 0.882
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.