STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS36Vacuolar protein-sorting-associated protein 36 isoform X1. (365 aa)    
Predicted Functional Partners:
VPS25
Vacuolar protein-sorting-associated protein 25.
   
 0.999
SNF8
ESCRT-II complex subunit VPS22.
   
 0.999
VPS28
Vacuolar protein sorting-associated protein 28 homolog.
    
 0.997
CHMP6
Charged multivesicular body protein 6 isoform X1.
    
 0.990
TSG101
Tumor susceptibility gene 101 protein isoform X1.
    
 0.982
UEVLD
Ubiquitin-conjugating enzyme E2 variant 3.
    
 0.978
RPS27A
Ribosomal protein S27a.
    
 0.970
LOC110080264
Charged multivesicular body protein 3.
     
 0.962
C17orf75
Protein Njmu-R1 isoform X1.
    
 0.958
CHMP4A
Charged multivesicular body protein 4a.
    
 0.955
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.