STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX7Sorting nexin-7/30. (439 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase isoform X1.
    
 0.963
SNX4
Sorting nexin-4.
  
 
 
0.933
ANKFY1
Rabankyrin-5.
   
 0.902
VPS35
Vacuolar protein sorting-associated protein 35.
   
 0.807
VPS26A
Vacuolar protein sorting-associated protein 26A.
   
 0.727
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 0.727
LOC110070886
Vacuolar protein sorting-associated protein 29-like.
   
 0.716
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
   
 0.716
DNAJC6
Putative tyrosine-protein phosphatase auxilin isoform X1.
    
 0.641
ENSPVIP00000002133
annotation not available
   
 0.631
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.