STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS18A39S ribosomal protein S18a, mitochondrial. (192 aa)    
Predicted Functional Partners:
MRPS18C
28S ribosomal protein S18c, mitochondrial.
   
 0.999
MRPL42
39S ribosomal protein L42, mitochondrial.
   
 0.993
MRPS14
28S ribosomal protein S14, mitochondrial isoform X1.
   
 0.991
MRPS18B
28S ribosomal protein S18b, mitochondrial isoform X1.
   
 0.990
MRPS15
28S ribosomal protein S15, mitochondrial.
   
 0.988
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 0.987
MRPS5
28S ribosomal protein S5, mitochondrial.
   
 0.987
MRPS33
28S ribosomal protein S33, mitochondrial.
   
 0.987
MRPS12
28S ribosomal protein S12, mitochondrial.
   
 0.987
MRPS11
28S ribosomal protein S11, mitochondrial.
   
 0.986
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.