Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DBF4Protein DBF4 homolog A isoform X1. (699 aa)    
Predicted Functional Partners:
CDC7
Cell division cycle 7-related protein kinase isoform X1.
   
 0.999
MCM4
DNA replication licensing factor MCM4.
   
 0.990
MCM2
DNA replication licensing factor MCM2.
   
 0.990
ORC6
Origin recognition complex subunit 6.
   
 0.989
ORC4
Origin recognition complex subunit 4.
    
 0.988
ORC2
Origin recognition complex subunit 2.
   
 0.985
MCM7
DNA replication licensing factor MCM7.
   
 0.982
MCM3
DNA replication licensing factor MCM3.
   
 0.979
MCM5
DNA replication licensing factor MCM5.
   
 0.967
CDT1
Chromatin licensing and DNA replication factor 1.
   
 
 0.959
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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