Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LIMD1LIM domain-containing protein 1. (699 aa)    
Predicted Functional Partners:
LATS1
Serine/threonine-protein kinase LATS1 isoform X1.
    
 
 0.802
RPS27A
Ribosomal protein S27a.
     
  0.798
LOC110089353
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like isoform X1.
    
 
 0.797
LATS2
Serine/threonine-protein kinase LATS2 isoform X1.
    
 
 0.796
RBX1
E3 ubiquitin-protein ligase RBX1.
     
 0.736
PHYHIP
Phytanoyl-CoA hydroxylase-interacting protein isoform X1.
    
   0.698
SAV1
Protein salvador homolog 1.
   
 
 0.673
MPHOSPH6
M-phase phosphoprotein 6, animal type.
      
 0.667
CUL2
Cullin-2 isoform X1.
     
  0.664
PSMC2
26S proteasome regulatory subunit T1.
     
 0.631
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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