STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110072832Caltractin-like. (171 aa)    
Predicted Functional Partners:
XPC
Xeroderma pigmentosum group C-complementing protein.
    
 0.885
SFI1
Protein SFI1 homolog.
    
 0.858
POC5
Centrosomal protein POC5 isoform X1.
    
 
 0.803
CCP110
Centriolar coiled-coil protein of 110 kDa isoform X1.
    
 0.774
CETN3
Centrin-3.
  
 
0.761
ERCC3
LOW QUALITY PROTEIN: TFIIH basal transcription factor complex helicase XPB subunit.
    
 0.755
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.737
RAD23A
UV excision repair protein RAD23 homolog A isoform X1.
   
 0.737
CEP164
Centrosomal protein of 164 kDa.
    
 0.735
AKAP9
A-kinase anchoring protein 9.
    
 0.734
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.