STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110072832Caltractin-like. (171 aa)    
Predicted Functional Partners:
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.961
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 0.913
XPC
Xeroderma pigmentosum group C-complementing protein.
    
 0.889
ENY2
ENY2 transcription and export complex 2 subunit.
   
 0.870
PCID2
PCI domain containing 2.
    
 0.827
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
    
 0.824
SFI1
Protein SFI1 homolog.
    
 
 0.748
NUP153
Nuclear pore complex protein Nup153 isoform X1.
    
 0.726
SAC3D1
SAC3 domain-containing protein 1.
    
 0.723
AKAP9
A-kinase anchoring protein 9.
    
 0.676
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.