STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS12Bardet-Biedl syndrome 12 protein. (728 aa)    
Predicted Functional Partners:
MKKS
McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X1.
    
 0.989
BBS10
Bardet-Biedl syndrome 10 protein.
    
 0.987
BBS7
Bardet-Biedl syndrome 7 protein isoform X1.
   
 0.983
TCP1
T-complex protein 1 subunit alpha.
    
 0.911
BBS2
Bardet-Biedl syndrome 2 protein.
    
 0.894
CCT8
T-complex protein 1 subunit theta isoform X1.
    
 0.893
BBS1
Bardet-Biedl syndrome 1 protein.
    
 0.839
CCT4
T-complex protein 1 subunit delta.
    
 0.836
CCT5
T-complex protein 1 subunit epsilon.
    
 0.836
CCT3
T-complex protein 1 subunit gamma.
    
 0.836
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.