Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (510 aa)    
Predicted Functional Partners:
ELAVL1
ELAV-like protein 1.
   
 0.928
MATR3
Matrin-3 isoform X1.
   
 
 0.884
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.874
QKI
Protein quaking isoform X1.
   
 
 0.857
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like.
   
 0.804
PUF60
Poly(U)-binding-splicing factor PUF60 isoform X1.
   
 
 0.797
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.762
ECH1
Heterogeneous nuclear ribonucleoprotein L.
   
 0.762
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B isoform X1.
   
 0.754
HNRNPD
Heterogeneous nuclear ribonucleoprotein D0 isoform X1.
   
 0.754
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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