STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FYCO1FYVE and coiled-coil domain-containing protein 1 isoform X1. (1539 aa)    
Predicted Functional Partners:
RAB7A
Ras-related protein Rab-7A.
    
 0.960
RAB7B
Ras-related protein Rab-7B.
     
 0.903
LOC110078636
Ras-related protein Rab-7a-like isoform X1.
     
 0.901
RUFY4
RUN and FYVE domain-containing protein 4 isoform X1.
     
 
0.900
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
   
 
 0.745
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 
 0.745
XCR1
Chemokine XC receptor 1.
      
 0.679
CXCR6
C-X-C chemokine receptor type 6.
      
 0.595
LZTFL1
Leucine zipper transcription factor-like protein 1 isoform X1.
      
 0.566
ZFYVE27
Protrudin isoform X1.
      
 0.566
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.