STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA5Spermatogenesis associated 5. (878 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7 isoform X1.
   
 0.966
DERL1
Derlin-1.
   
 0.850
ATXN3
Ataxin-3 isoform X1.
   
 0.843
UBXN1
UBX domain-containing protein 1/4.
   
 0.822
YOD1
Ubiquitin thioesterase OTU1 isoform X1.
   
 0.820
PSMD2
26S proteasome non-ATPase regulatory subunit 2.
   
 0.816
NGLY1
N-glycanase 1.
    
 0.811
CINP
Cyclin-dependent kinase 2-interacting protein isoform X1.
   
 0.807
SPRTN
SprT-like domain-containing protein Spartan.
   
 0.792
NSFL1C
UBX domain-containing protein 1.
   
 0.791
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.