STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD50Ankyrin repeat domain-containing protein 50. (1418 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase 6 catalytic subunit.
    
 0.662
VPS35
Vacuolar protein sorting-associated protein 35.
    
 
 0.627
LOC110070886
Vacuolar protein sorting-associated protein 29-like.
    
 
 0.454
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
    
 
 0.454
AUP1
Ancient ubiquitous protein 1.
      
 0.434
CFAP52
Cilia- and flagella-associated protein 52.
    
 0.414
ENSPVIP00000001188
annotation not available
    
 0.402
ENSPVIP00000003071
annotation not available
    
 0.402
PPP6R2
Serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1.
    
 0.402
PPP6R1
Serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X1.
    
 0.402
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (42%) [HD]