Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDV3Protein CDV3 homolog isoform X1. (210 aa)    
Predicted Functional Partners:
TFDP2
Transcription factor Dp-2 isoform X1.
      
 0.692
RNF7
RING-box protein 2 isoform X1.
      
 0.631
PA2G4
Proliferation-associated protein 2G4.
   
  
 0.587
LOC110077347
Small EDRK-rich factor 1-like.
      
 0.479
DAP
Death-associated protein 1.
      
 0.446
TFDP1
Transcription factor Dp-1 isoform X1.
      
 0.431
RASIP1
Ras-interacting protein 1 isoform X1.
      
 0.430
RADIL
Ras-associating and dilute domain-containing protein isoform X1.
      
 0.430
PCCB
Propionyl-CoA carboxylase beta chain, mitochondrial isoform X1.
      
 0.402
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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