STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000002409annotation not available (489 aa)    
Predicted Functional Partners:
DDX10
Probable ATP-dependent RNA helicase DDX10.
   
 
 0.948
NOL10
Ribosome biogenesis protein ENP2.
   
 
 0.943
ESF1
ESF1 homolog isoform X1.
 
     0.930
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10.
   
 
 0.926
KRR1
KRR1 small subunit processome component homolog isoform X1.
   
 
 0.923
UTP3
U3 small nucleolar RNA-associated protein 3.
   
 
 0.923
UTP6
U3 small nucleolar RNA-associated protein 6 homolog isoform X1.
   
 
 0.921
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
 
 0.911
AATF
Protein AATF/BFR2.
   
 
 0.911
NOL6
U3 small nucleolar RNA-associated protein 22.
   
 
 0.905
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.