Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYN1Synapsin I. (507 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.742
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 0.729
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.643
SYT1
Synaptotagmin-1.
   
 0.637
SYT2
Synaptotagmin-2 isoform X1.
   
 0.637
SYT5
Synaptotagmin-5.
   
 0.637
ITSN2
Intersectin-2 isoform X1.
    
 
 0.637
ENSPVIP00000005587
annotation not available
   
 
 0.587
STXBP2
Syntaxin-binding protein 2 isoform X1.
   
 
 0.587
STXBP1
Syntaxin-binding protein 1 isoform X1.
   
 
 0.587
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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