Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NGFNerve growth factor, beta. (242 aa)    
Predicted Functional Partners:
NGFR
Tumor necrosis factor receptor superfamily member 16.
     
 0.978
LOC110069991
Tumor necrosis factor receptor superfamily member 16-like.
     
  0.900
NTRK3
Neurotrophic tyrosine kinase, receptor type 3.
     
 0.840
NTRK2
Neurotrophic tyrosine kinase receptor type 2.
     
 0.840
PDGFRA
LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha.
  
  
  0.717
IGF1R
Insulin like growth factor 1 receptor.
     
  0.670
EPHA2
Ephrin type-A receptor 2.
     
  0.670
INSR
Insulin receptor.
     
  0.670
MET
Hepatocyte growth factor receptor isoform X1.
     
  0.670
RET
Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1.
     
 0.651
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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