STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFSD8MFS transporter, ceroid-lipofuscinosis neuronal protein 7. (539 aa)    
Predicted Functional Partners:
LOC110089827
Major facilitator superfamily domain-containing protein 8-like isoform X1.
     
 
0.900
CLN8
Ceroid-lipofuscinosis neuronal protein 8.
      
 0.847
MPL
Thrombopoietin receptor.
    
 0.782
CLN6
Ceroid-lipofuscinosis neuronal protein 6 isoform X1.
      
 0.768
CLN3
Battenin isoform X1.
    
 
 0.749
CLN5
Ceroid-lipofuscinosis neuronal protein 5.
      
 0.729
ABHD18
Protein ABHD18 isoform X1.
      
 0.694
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.694
NPSR1
Neuropeptide S receptor.
      
 0.650
RPP25L
Ribonuclease P protein subunit p25-like protein.
      
 0.637
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.