Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SYCP1Synaptonemal complex protein 1. (105 aa)    
Predicted Functional Partners:
LOC110081148
Synaptonemal complex central element protein 1-like isoform X1.
    
 0.977
SYCE2
Synaptonemal complex central element protein 2 isoform X1.
    
 0.975
SYCE3
Synaptonemal complex central element protein 3.
    
 0.958
TEX12
Testis expressed 12.
    
 0.889
SYCP3
Synaptonemal complex protein 3.
    
 0.876
SYCP2L
Synaptonemal complex protein 2-like.
   
 0.758
RAD21
Double-strand-break repair protein rad21 homolog.
    
 0.711
ZBTB16
Zinc finger and BTB domain-containing protein 16.
    
 0.705
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.669
ALKBH4
alkB homolog 4, lysine demethylase.
      
 0.667
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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