Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JADE1Protein Jade-1 isoform X1. (866 aa)    
Predicted Functional Partners:
ING4
Inhibitor of growth protein 4 isoform X1.
    
 0.962
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 
 0.814
KAT8
Histone acetyltransferase MYST1.
    
 0.718
KAT5
Histone acetyltransferase HTATIP.
    
 0.718
LOC110069898
Histone acetyltransferase HTATIP.
    
 0.718
KAT7
Histone acetyltransferase KAT7 isoform X1.
    
 0.718
SFMBT2
Scm-like with four MBT domains protein 2 isoform X1.
      
 0.695
PACC1
Transmembrane protein 206.
      
 0.664
LARP1B
La-related protein 1B isoform X1.
      
 0.623
SLC38A4
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 4.
      
 0.618
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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