STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX2Sorting nexin-2 isoform X1. (523 aa)    
Predicted Functional Partners:
SNX1
Sorting nexin-1/2.
  
0.999
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.993
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 
 0.969
VPS26A
Vacuolar protein sorting-associated protein 26A.
   
 
 0.967
LOC110070886
Vacuolar protein sorting-associated protein 29-like.
   
 
 0.952
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
   
 
 0.952
SNX4
Sorting nexin-4.
   
 
 0.936
SNX27
Sorting nexin-27.
   
 
 0.876
FAM221A
Protein FAM221A isoform X1.
    
   0.854
ENSPVIP00000002133
annotation not available
   
 0.841
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.