STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBE1Tubulin epsilon chain isoform X1. (537 aa)    
Predicted Functional Partners:
TUBD1
Tubulin delta chain.
   
 0.913
FGL1
Fibrinogen-like protein 1.
    
   0.771
TCP1
T-complex protein 1 subunit alpha.
   
 0.665
ENSPVIP00000006312
annotation not available
   
 0.653
NME8
Thioredoxin domain-containing protein 3.
   
 0.653
ENSPVIP00000006316
annotation not available
   
 0.653
WDR90
WD repeat-containing protein 90-like.
   
 0.646
IL1R2
Interleukin 1 receptor type II.
    
 
 0.645
CCT2
T-complex protein 1 subunit beta.
   
 0.618
EEF1G
Elongation factor 1-gamma.
   
 
 0.603
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.