STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBE1Tubulin epsilon chain isoform X1. (537 aa)    
Predicted Functional Partners:
WDR90
WD repeat-containing protein 90-like.
   
 0.742
DCLK1
Serine/threonine-protein kinase DCLK1 isoform X1.
    
 
 0.685
IRAK1BP1
Interleukin-1 receptor-associated kinase 1-binding protein 1.
      
 0.649
CENPK
Centromere protein K.
   
 0.648
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.641
LOC110070601
Tubulin alpha-3 chain-like.
   
0.638
LOC110073375
Tubulin alpha-8 chain.
   
0.638
TUBA8
Tubulin alpha-8 chain isoform X1.
   
0.638
LOC110070395
Tubulin alpha-4 chain-like.
   
0.638
LOC110083393
Tubulin alpha-3 chain isoform X1.
   
0.638
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.