STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP34Ubiquitin carboxyl-terminal hydrolase 34. (3467 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12.
   
 
 0.946
RPS27A
Ribosomal protein S27a.
   
 0.884
ASH1L
[histone H3]-lysine4 N-trimethyltransferase ASH1L.
   
 
 0.863
UBC
Polyubiquitin-C.
   
 0.817
USP9X
Probable ubiquitin carboxyl-terminal hydrolase FAF-X.
   
 0.778
SETD2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
   
   0.760
NIPBL
Cohesin loading factor subunit SCC2.
   
    0.749
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.745
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.742
LOC110072526
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.742
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.